SLPOtherJournal of speech, language, and hearing research : JSLHR2020

Automated Phenotyping Tool for Identifying Developmental Language Disorder Cases in Health Systems Data (APT-DLD): A New Research Algorithm for Deployment in Large-Scale Electronic Health Record Systems.

Courtney E Walters, Rachana Nitin, Katherine Margulis and 8 others

PMID 32791019

WHAT IT FOUND

An automated algorithm accurately identifies Developmental Language Disorder cases in electronic health records by filtering for specific diagnosis codes.

It achieved 95% positive predictive value in a discovery sample and 90% in a larger replication sample, allowing researchers to find large patient cohorts without manual chart review.

Key findings

01The algorithm achieved a positive predictive value of 95% in the discovery sample and 90% in the replication sample when compared to speech-language pathologist manual chart reviews.

02The tool successfully classified 6,013 cases as Developmental Language Disorder in a replication sample of 13,652 pediatric records.

03The algorithm is conservative, with a high false-negative rate in the replication sample, meaning it may miss some true cases of Developmental Language Disorder.

STILL TO COME

How it was doneWhat they foundWhat it means for SLPs

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What it does not show

The algorithm cannot access individual IQ scores, language test results, or educational outcomes, relying solely on diagnostic codes. The study was conducted using data from a single institution (Vanderbilt University Medical Center), which may limit generalizability to other populations. The algorithm is conservative and misses some true DLD cases (false negatives), particularly those where language issues are noted in text but not coded with specific ICD codes. The phenotype definition is based on English-speaking countries and may require validation for international health systems.

Declared interests

Research was supported by the National Institute on Deafness and Other Communication Disorders and the National Institutes of Health. Data sets were obtained from Vanderbilt University Medical Center's BioVU, supported by institutional funding and NIH grants.

The easy way to misread this

Do not assume this algorithm is a diagnostic replacement for clinical evaluation. It is designed for research cohort identification and has a notable miss rate (false negatives), meaning it will fail to identify some patients who truly have Developmental Language Disorder.

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